Medical Genetics
Study Course Implementer
Riga, 16 Dzirciema Street, bmk@rsu.lv, +371 67061584
About Study Course
Objective
Preliminary Knowledge
Learning Outcomes
Knowledge
1.On successful completion of the course, students will be able to recognize and characterize main types of human heritable pathologies, their inheritance; explain laws of inheritance of human traits; characterize heritable and sporadic mutations and clarify their role in human pathologies; explain interaction between genetic and environmental factors and its importance in developing multifactorial traits.
Skills
1.As a result of completing the study course, students will be able to recognize the most common genetic diseases, understand their mechanisms of development, clinical presentation, therapy, and prognosis, and analyze and calculate the risk of genetic pathology in offspring.
Competences
1.Upon combining theoretical knowledge and practical skills, the students will be able to implement them in a unified integrative diagnostic activity. Students will be able to attribute the impairment of gene defects to the pathology of the body as a whole. They will understand the role of heredity in the aetiology of diseases.
Assessment
Individual work
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Title
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% from total grade
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Grade
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|---|---|---|
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1.
Individual work |
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-
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Individual work with the lecture and practical classes materials, recommended literature, according to the topics of lectures and practical classes. Analysis of scientific publications to acquire deeper understanding of the study course topics (if necessary). Preparation for regular pre-class tests. Tasks related to risk calculation for monogenic disorders and karyotype analysis. Problem sets are in e-studies. Preparation for Upon completion the study course, fill in the study course evaluation questionnaire.
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Examination
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Title
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% from total grade
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Grade
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|---|---|---|
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1.
Examination Darba veids Pārbaudījums Pārbaudījuma veids Cits Virsraksts Virsraksts (EN) |
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10 points
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Regular attendance and active participation in workshops; answers to previously known questions during classes, end-of-topic colloquium – examination of acquired theoretical knowledge and practical skills, clinical application. At the end of the third semester, an examination from the cumulative assessment. The cumulative assessment shall include: marks from two successful colloquiums (75%), responses during classes (15%) and presentations on mechanisms and options for molecular genetics-based therapy (10%). The examination shall be conducted in writing, consisting of two open-type questions and 5 practical tasks, by students who have not obtained a successful assessment in the cumulative assessment. Students are given the opportunity to demonstrate understanding of important genetics laws and their association with human pathology. |
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Study Course Theme Plan
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Video Lecture
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Modality
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Location
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Contact hours
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|---|---|---|
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Off site
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E-Studies platform
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2
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Topics
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Medical genetics. History (additional material).
Mendelis genetics. Gene interaction, complete, incomplete association.
Domination, imperfect domination, coding, epistasis.
Pedigree symbols (additional material).
Types of genetic variants (additional material).
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Video Lecture
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Modality
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Location
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Contact hours
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|---|---|---|
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Off site
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E-Studies platform
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2
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Topics
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Autosomal dominant (AD) I inheritance pattern. Characteristic features of this inheritance pattern.
Classic pedigree examples. Marfan syndrome. Neurofibromatosis. Achondroplasia.
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Video Lecture
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Modality
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Location
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Contact hours
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|---|---|---|
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Off site
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E-Studies platform
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2
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Topics
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Autosomal dominant inheritance pattern II
Familial hypercholesterolemia
Charcot–Marie–Tooth disease type 1A
Huntington’s chorea (Huntington disease)
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Video Lecture
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Modality
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Location
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Contact hours
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|---|---|---|
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Off site
|
E-Studies platform
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2
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Topics
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Autosomal recessive (AR) inheritance pattern.
Characteristic features of this inheritance pattern.
Classic pedigree examples.
Cystic fibrosis.
Spinal muscular atrophy.
Phenylketonuria. Hardy–Weinberg equation.
Sickle cell anemia.
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-
Video Lecture
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Modality
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Location
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Contact hours
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|---|---|---|
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Off site
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E-Studies platform
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2
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Topics
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X-linked inheritance pattern, characteristic features, pedigree examples.
Fabry disease. Duchenne muscular dystrophy.
Rett syndrome. Hemophilia. Fragile X syndrome.
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Video Lecture
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Modality
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Location
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Contact hours
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|---|---|---|
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Off site
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E-Studies platform
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2
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Topics
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Mitochondrial diseases. Mitochondrial inheritance pattern and nuclear gene–caused disorders. Heteroplasmy.
Criteria of inheritance patterns.
MELAS syndrome. Leigh syndrome. Mitochondrial DNA depletion syndrome.
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Video Lecture
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Modality
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Location
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Contact hours
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|---|---|---|
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Off site
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E-Studies platform
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2
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Topics
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Multifactorial inheritance pattern.
Autism spectrum disorders. Cleft lip / cleft palate. Pyloric stenosis.
Clubfoot.
Celiac disease. HLA alleles
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Video Lecture
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Modality
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Location
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Contact hours
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|---|---|---|
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Off site
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E-Studies platform
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2
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Topics
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Chromosomal disorders – numerical and structural abnormalities of autosomes and sex chromosomes.
Down syndrome. Patau syndrome and Edwards syndrome.
Klinefelter syndrome.
Turner syndrome.
Karyotype notation (supplementary material).
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Video Lecture
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Modality
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Location
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Contact hours
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|---|---|---|
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Off site
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E-Studies platform
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2
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Topics
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Chromosomal structural abnormalities, their types. Recurrent and non-recurrent deletions/duplications.
Microdeletion / microduplication syndromes.
22q11 deletion.
Williams syndrome.
16p11.2 deletion / duplication.
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Video Lecture
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Modality
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Location
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Contact hours
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|---|---|---|
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Off site
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E-Studies platform
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2
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Topics
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Epigenetics.
DNA methylation. X-chromosome inactivation.
Behavioral epigenetics.
Imprinting, significance, pedigree. Diseases:
Prader–Willi syndrome.
Angelman syndrome.
Beckwith–Wiedemann syndrome.
Silver–Russell syndrome.
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Video Lecture
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Modality
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Location
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Contact hours
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|---|---|---|
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Off site
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E-Studies platform
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2
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Topics
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Sex differentiation. Disorders of sex differentiation (DSD).
46, XX DSD.
46, XY DSD.
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Video Lecture
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Modality
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Location
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Contact hours
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|---|---|---|
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Off site
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E-Studies platform
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2
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Topics
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Infertility – female, male, diagnostics.
Assisted fertilization.
Preimplantation diagnosis.
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Video Lecture
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Modality
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Location
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Contact hours
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|---|---|---|
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Off site
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E-Studies platform
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2
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Topics
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Cancer genetics.
Cell life cycle, death, checkpoints, apoptosis, necrosis.
Retinoblastoma.
Breast / ovarian cancer.
Lynch syndrome.
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Video Lecture
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Modality
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Location
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Contact hours
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|---|---|---|
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Off site
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E-Studies platform
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2
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Topics
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Pharmacogenetics I. Xenobiotic metabolism.
Cytochrome system. Personalized medicine.
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Video Lecture
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Modality
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Location
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Contact hours
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|---|---|---|
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Off site
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E-Studies platform
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2
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Topics
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Pharmacogenetics II.
Examples of therapies for different genetic diseases.
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Video Lecture
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Modality
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Location
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Contact hours
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|---|---|---|
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Off site
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E-Studies platform
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2
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Topics
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Eugenics.
Newborn screening. Genetic screening.
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Class/Seminar
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Modality
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Location
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Contact hours
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|---|---|---|
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On site
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Study room
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2
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Topics
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Mendelian genetics problems, Mendelian traits in humans, trait expression.
Blood group genetics.
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Class/Seminar
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Modality
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Location
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Contact hours
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|---|---|---|
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On site
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Study room
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2
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Topics
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Autosomal dominant (AD) inheritance pattern. Bayes method. Pedigree analysis.
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-
Class/Seminar
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Modality
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Location
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Contact hours
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|---|---|---|
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On site
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Study room
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2
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Topics
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Autosomal dominant inheritance pattern. Problem solving.
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-
Class/Seminar
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Modality
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Location
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Contact hours
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|---|---|---|
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On site
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Study room
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2
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Topics
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Autosomal recessive inheritance pattern. Pedigree examples. Hardy–Weinberg equation. Problem solving.
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-
Class/Seminar
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Modality
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Location
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Contact hours
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|---|---|---|
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On site
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Study room
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2
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Topics
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X-linked inheritance pattern. Typical pedigrees and problem solving.
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-
Class/Seminar
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Modality
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Location
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Contact hours
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|---|---|---|
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On site
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Study room
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2
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Topics
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Mitochondrial inheritance pattern. Heteroplasmy. Clinical cases.
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-
Class/Seminar
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Modality
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Location
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Contact hours
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|---|---|---|
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On site
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Study room
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2
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Topics
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Comparison of monogenic and multifactorial types. Concordance tasks. Risk calculations.
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Lecture
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Modality
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Location
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Contact hours
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|---|---|---|
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On site
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Auditorium
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2
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Topics
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Colloquium I
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Class/Seminar
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Modality
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Location
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Contact hours
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|---|---|---|
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On site
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Study room
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2
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Topics
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Changes in chromosome number. Karyotype notation. Recurrence risks.
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-
Class/Seminar
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Modality
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Location
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Contact hours
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|---|---|---|
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On site
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Study room
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2
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Topics
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Changes in chromosome structure. Karyotype notation. Recurrence risks.
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-
Class/Seminar
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Modality
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Location
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Contact hours
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|---|---|---|
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On site
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Study room
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2
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Topics
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Epigenetics. Imprinting. Pedigree examples. Risk calculation.
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-
Class/Seminar
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Modality
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Location
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Contact hours
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|---|---|---|
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On site
|
Study room
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2
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Topics
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Sex differentiation and its disorders. Solving clinical cases. Infertility, its possible solutions. The role of genetics in it.
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-
Class/Seminar
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Modality
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Location
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Contact hours
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|---|---|---|
|
On site
|
Study room
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2
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Topics
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Cancer genetics. Clinical cases. Clinical interpretation of genetic variants.
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-
Class/Seminar
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Modality
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Location
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Contact hours
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|---|---|---|
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On site
|
Study room
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2
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Topics
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Pharmacogenetics. Personalized medicine.
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-
Class/Seminar
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Modality
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Location
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Contact hours
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|---|---|---|
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On site
|
Study room
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2
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Topics
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Student presentations on innovative therapeutic options for genetic diseases.
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-
Class/Seminar
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Modality
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Location
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Contact hours
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|---|---|---|
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On site
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Study room
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2
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Topics
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Student presentations on innovative therapeutic options for genetic diseases. II
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-
Lecture
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Modality
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Location
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Contact hours
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|---|---|---|
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On site
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Auditorium
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2
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Topics
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Colloquium II
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-
Class/Seminar
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Modality
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Location
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Contact hours
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|---|---|---|
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On site
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Study room
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2
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Topics
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Discussion on genetic screenings and eugenics.
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Bibliography
Required Reading
Jorde L., Corey J., Bamshad M., 2020. Medical genetics. 6th edition, Mosby.Suitable for English stream
Schaefer G., Thompson, Jr. J.N. eds., 2017. Medical Genetics: An Integrated Approach. McGraw Hill. (Access Medicine).Suitable for English stream
Additional Reading
Emery and Rimoin’s Principles and Practice of Medical Genetics and Genomics. 7th Edition. 2018.Suitable for English stream
Vogel and Motulsky's Human Genetics. Problems and Approaches. The 4th edition, Springer, 2010.Suitable for English stream