Veidlapa Nr. M-3 (8)
Study Course Description

Medical Genetics

Main Study Course Information

Course Code
BUMK_083
Branch of Science
Clinical medicine; Medicinal Genetics
ECTS
6.00
Target Audience
Medicine
LQF
Level 7
Study Type And Form
Full-Time

Study Course Implementer

Course Supervisor
Structure Unit Manager
Structural Unit
Department of Biology and Microbiology
Contacts

Riga, 16 Dzirciema Street, bmk@rsu.lv, +371 67061584

About Study Course

Objective

To promote the acquisition of knowledge of the role of genetic processes in health preservation and disease development; to help to understand the role of science in the development of medicine and to develop the necessary skills for application of this knowledge in medical practice.

Preliminary Knowledge

Molecular biology and genetics, human anatomy and physiology, physics and biochemistry.

Learning Outcomes

Knowledge

1.On successful completion of the course, students will be able to recognize and characterize main types of human heritable pathologies, their inheritance; explain laws of inheritance of human traits; characterize heritable and sporadic mutations and clarify their role in human pathologies; explain interaction between genetic and environmental factors and its importance in developing multifactorial traits.

Skills

1.As a result of completing the study course, students will be able to recognize the most common genetic diseases, understand their mechanisms of development, clinical presentation, therapy, and prognosis, and analyze and calculate the risk of genetic pathology in offspring.

Competences

1.Upon combining theoretical knowledge and practical skills, the students will be able to implement them in a unified integrative diagnostic activity. Students will be able to attribute the impairment of gene defects to the pathology of the body as a whole. They will understand the role of heredity in the aetiology of diseases.

Assessment

Individual work

Title
% from total grade
Grade
1.

Individual work

-
-
Individual work with the lecture and practical classes materials, recommended literature, according to the topics of lectures and practical classes. Analysis of scientific publications to acquire deeper understanding of the study course topics (if necessary). Preparation for regular pre-class tests. Tasks related to risk calculation for monogenic disorders and karyotype analysis. Problem sets are in e-studies. Preparation for Upon completion the study course, fill in the study course evaluation questionnaire.

Examination

Title
% from total grade
Grade
1.

Examination Darba veids Pārbaudījums Pārbaudījuma veids Cits Virsraksts Virsraksts (EN)

-
10 points

Regular attendance and active participation in workshops; answers to previously known questions during classes, end-of-topic colloquium – examination of acquired theoretical knowledge and practical skills, clinical application. At the end of the third semester, an examination from the cumulative assessment.

The cumulative assessment shall include: marks from two successful colloquiums (75%), responses during classes (15%) and presentations on mechanisms and options for molecular genetics-based therapy (10%). The examination shall be conducted in writing, consisting of two open-type questions and 5 practical tasks, by students who have not obtained a successful assessment in the cumulative assessment. Students are given the opportunity to demonstrate understanding of important genetics laws and their association with human pathology.

Study Course Theme Plan

FULL-TIME
Part 1
  1. Video Lecture

Modality
Location
Contact hours
Off site
E-Studies platform
2

Topics

Medical genetics. History (additional material). Mendelis genetics. Gene interaction, complete, incomplete association. Domination, imperfect domination, coding, epistasis. Pedigree symbols (additional material). Types of genetic variants (additional material).
  1. Video Lecture

Modality
Location
Contact hours
Off site
E-Studies platform
2

Topics

Autosomal dominant (AD) I inheritance pattern. Characteristic features of this inheritance pattern. Classic pedigree examples. Marfan syndrome. Neurofibromatosis. Achondroplasia.
  1. Video Lecture

Modality
Location
Contact hours
Off site
E-Studies platform
2

Topics

Autosomal dominant inheritance pattern II Familial hypercholesterolemia Charcot–Marie–Tooth disease type 1A Huntington’s chorea (Huntington disease)
  1. Video Lecture

Modality
Location
Contact hours
Off site
E-Studies platform
2

Topics

Autosomal recessive (AR) inheritance pattern. Characteristic features of this inheritance pattern. Classic pedigree examples. Cystic fibrosis. Spinal muscular atrophy. Phenylketonuria. Hardy–Weinberg equation. Sickle cell anemia.
  1. Video Lecture

Modality
Location
Contact hours
Off site
E-Studies platform
2

Topics

X-linked inheritance pattern, characteristic features, pedigree examples. Fabry disease. Duchenne muscular dystrophy. Rett syndrome. Hemophilia. Fragile X syndrome.
  1. Video Lecture

Modality
Location
Contact hours
Off site
E-Studies platform
2

Topics

Mitochondrial diseases. Mitochondrial inheritance pattern and nuclear gene–caused disorders. Heteroplasmy. Criteria of inheritance patterns. MELAS syndrome. Leigh syndrome. Mitochondrial DNA depletion syndrome.
  1. Video Lecture

Modality
Location
Contact hours
Off site
E-Studies platform
2

Topics

Multifactorial inheritance pattern. Autism spectrum disorders. Cleft lip / cleft palate. Pyloric stenosis. Clubfoot. Celiac disease. HLA alleles
  1. Video Lecture

Modality
Location
Contact hours
Off site
E-Studies platform
2

Topics

Chromosomal disorders – numerical and structural abnormalities of autosomes and sex chromosomes. Down syndrome. Patau syndrome and Edwards syndrome. Klinefelter syndrome. Turner syndrome. Karyotype notation (supplementary material).
  1. Video Lecture

Modality
Location
Contact hours
Off site
E-Studies platform
2

Topics

Chromosomal structural abnormalities, their types. Recurrent and non-recurrent deletions/duplications. Microdeletion / microduplication syndromes. 22q11 deletion. Williams syndrome. 16p11.2 deletion / duplication.
  1. Video Lecture

Modality
Location
Contact hours
Off site
E-Studies platform
2

Topics

Epigenetics. DNA methylation. X-chromosome inactivation. Behavioral epigenetics. Imprinting, significance, pedigree. Diseases: Prader–Willi syndrome. Angelman syndrome. Beckwith–Wiedemann syndrome. Silver–Russell syndrome.
  1. Video Lecture

Modality
Location
Contact hours
Off site
E-Studies platform
2

Topics

Sex differentiation. Disorders of sex differentiation (DSD). 46, XX DSD. 46, XY DSD.
  1. Video Lecture

Modality
Location
Contact hours
Off site
E-Studies platform
2

Topics

Infertility – female, male, diagnostics. Assisted fertilization. Preimplantation diagnosis.
  1. Video Lecture

Modality
Location
Contact hours
Off site
E-Studies platform
2

Topics

Cancer genetics. Cell life cycle, death, checkpoints, apoptosis, necrosis. Retinoblastoma. Breast / ovarian cancer. Lynch syndrome.
  1. Video Lecture

Modality
Location
Contact hours
Off site
E-Studies platform
2

Topics

Pharmacogenetics I. Xenobiotic metabolism. Cytochrome system. Personalized medicine.
  1. Video Lecture

Modality
Location
Contact hours
Off site
E-Studies platform
2

Topics

Pharmacogenetics II. Examples of therapies for different genetic diseases.
  1. Video Lecture

Modality
Location
Contact hours
Off site
E-Studies platform
2

Topics

Eugenics. Newborn screening. Genetic screening.
  1. Class/Seminar

Modality
Location
Contact hours
On site
Study room
2

Topics

Mendelian genetics problems, Mendelian traits in humans, trait expression. Blood group genetics.
  1. Class/Seminar

Modality
Location
Contact hours
On site
Study room
2

Topics

Autosomal dominant (AD) inheritance pattern. Bayes method. Pedigree analysis.
  1. Class/Seminar

Modality
Location
Contact hours
On site
Study room
2

Topics

Autosomal dominant inheritance pattern. Problem solving.
  1. Class/Seminar

Modality
Location
Contact hours
On site
Study room
2

Topics

Autosomal recessive inheritance pattern. Pedigree examples. Hardy–Weinberg equation. Problem solving.
  1. Class/Seminar

Modality
Location
Contact hours
On site
Study room
2

Topics

X-linked inheritance pattern. Typical pedigrees and problem solving.
  1. Class/Seminar

Modality
Location
Contact hours
On site
Study room
2

Topics

Mitochondrial inheritance pattern. Heteroplasmy. Clinical cases.
  1. Class/Seminar

Modality
Location
Contact hours
On site
Study room
2

Topics

Comparison of monogenic and multifactorial types. Concordance tasks. Risk calculations.
  1. Lecture

Modality
Location
Contact hours
On site
Auditorium
2

Topics

Colloquium I
  1. Class/Seminar

Modality
Location
Contact hours
On site
Study room
2

Topics

Changes in chromosome number. Karyotype notation. Recurrence risks.
  1. Class/Seminar

Modality
Location
Contact hours
On site
Study room
2

Topics

Changes in chromosome structure. Karyotype notation. Recurrence risks.
  1. Class/Seminar

Modality
Location
Contact hours
On site
Study room
2

Topics

Epigenetics. Imprinting. Pedigree examples. Risk calculation.
  1. Class/Seminar

Modality
Location
Contact hours
On site
Study room
2

Topics

Sex differentiation and its disorders. Solving clinical cases. Infertility, its possible solutions. The role of genetics in it.
  1. Class/Seminar

Modality
Location
Contact hours
On site
Study room
2

Topics

Cancer genetics. Clinical cases. Clinical interpretation of genetic variants.
  1. Class/Seminar

Modality
Location
Contact hours
On site
Study room
2

Topics

Pharmacogenetics. Personalized medicine.
  1. Class/Seminar

Modality
Location
Contact hours
On site
Study room
2

Topics

Student presentations on innovative therapeutic options for genetic diseases.
  1. Class/Seminar

Modality
Location
Contact hours
On site
Study room
2

Topics

Student presentations on innovative therapeutic options for genetic diseases. II
  1. Lecture

Modality
Location
Contact hours
On site
Auditorium
2

Topics

Colloquium II
  1. Class/Seminar

Modality
Location
Contact hours
On site
Study room
2

Topics

Discussion on genetic screenings and eugenics.
Total ECTS (Creditpoints):
6.00
Contact hours:
68 Academic Hours
Final Examination:
Exam

Bibliography

Required Reading

1.

Jorde L., Corey J., Bamshad M., 2020. Medical genetics. 6th edition, Mosby.Suitable for English stream

2.

Schaefer G., Thompson, Jr. J.N. eds., 2017. Medical Genetics: An Integrated Approach. McGraw Hill. (Access Medicine).Suitable for English stream

Additional Reading

1.

Emery and Rimoin’s Principles and Practice of Medical Genetics and Genomics. 7th Edition. 2018.Suitable for English stream

2.

Vogel and Motulsky's Human Genetics. Problems and Approaches. The 4th edition, Springer, 2010.Suitable for English stream

3.

GeneReviews

Other Information Sources

1.

Online Mendelian Inheritance in MenSuitable for English stream