Veidlapa Nr. M-3 (8)
Study Course Description

Examination Methods - Express Methods and Their Interpretation in a General Microbiology Laboratory in the Field of Parasitology, Mycology, STD and Virology

Main Study Course Information

Course Code
RKM_025
Branch of Science
Clinical medicine
ECTS
13.00
Target Audience
Medicine
LQF
Level 8

Study Course Implementer

Course Supervisor

Residency Speciality

Speciality
Supervisor of Medical Speciality
Contacts

-

About Study Course

Objective

To provide knowledge and practical skills related to express methods and their interpretation in a general microbiology laboratory in the field of parasitology, mycology, STD and virology.

Learning Outcomes

Knowledge

1.To formulate the algorithms of examination of various clinical materials, describe the examination of the results, interpret the antibiotic sensitivity results.

Skills

1.To practically perform bacteriological examination of various clinical materials using conventional and express methods and interpret the results.

Competences

1.To choose the right algorithm for bacteriological examination based on the results, understand and advise on the mechanisms of antibiotic resistance of the isolated strain.

Assessment

Individual work

Title
% from total grade
Grade
1.

Individual work

-
-
Literature analysis, independent preparation for lectures/lessons, presentations on culture media, identification tests, operating principles of commercial systems, as well as mechanisms of resistance to antibiotic substances.

Examination

Title
% from total grade
Grade
1.

Examination

-
-
Assessment of practical skills and theoretical knowledge - analysis of laboratory results, assessed on a 10-point scale, which accounts for 50% of the final score, exam - 50%.

Study Course Theme Plan

FULL-TIME
Part 1
  1. Seminar

Modality
Location
-
-

Topics

Blood culture: methods of examination and interpretation of results
  1. Seminar

Modality
Location
-
-

Topics

Cultures of primarily sterile body fluids (except blood, cerebrospinal fluid and urine): methods of examination and interpretation of results
  1. Seminar

Modality
Location
-
-

Topics

Diagnosis and differential diagnosis of catheter-related infections. Microbiological examination of catheter tips
  1. Seminar

Modality
Location
-
-

Topics

Microbiological examination of cerebrospinal fluid and interpretation of results
  1. Seminar

Modality
Location
-
-

Topics

Microbiological examination of gastroenteritis: cultivation of aerobic pathogens, C.difficile infection, diagnosis of Campylobacter and H.pylori and interpretation of results
  1. Seminar

Modality
Location
-
-

Topics

Guidelines for bacteriological examination of genitals. Group B beta-hemolytic streptococcus diagnosis and screening of pregnant women
  1. Seminar

Modality
Location
-
-

Topics

Bacteriological diagnosis of eye diseases
  1. Seminar

Modality
Location
-
-

Topics

Upper and lower respiratory tract bacteriological examination and interpretation of results
  1. Seminar

Modality
Location
-
-

Topics

Bacteriological examination of urine and interpretation of results
  1. Seminar

Modality
Location
-
-

Topics

Wound and deep tissue infections: methods of examination and interpretation of results
  1. Seminar

Modality
Location
-
-

Topics

Methods for antimicrobial susceptibility testing: disc diffusion, broth dilution, E-test, agar dilution method. Automated commercial systems
  1. Seminar

Modality
Location
-
-

Topics

Mechanisms of resistance: change of the target molecule, production of enzymes, reduction of cell wall permeability, efflux system, alternative metabolic pathway. Methods of determining the main resistance mechanisms
Total ECTS (Creditpoints):
13.00
Number of Residency Seminars:
12
Length (weeks):
10
Final Examination:
Residency exam (Theory and practice)

Bibliography

Required Reading

2.

Manual of Clinical Microbiology. 12th ed., 2019

3.

Clinical microbiology procedures handbook. 4th ed., 2016

Other Information Sources

1.

ClinicalKey

2.

AccessMedicine

3.

PubMed

4.

ScienceDirect